Cluster: HRGMv2_4564_CGC29
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4564
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4564_4 | HRGMv2_4564_4_31 | 30476 | 31051 | + | 4.F.1.1.7 |
| pfam | HRGMv2_4564_4 | HRGMv2_4564_4_32 | 31147 | 32541 | + | tRNA-synt_1e | DALR_2 | tRNA-synt_1g | tRNA-synt_1g | CysS_C |
| CAZyme | HRGMv2_4564_4 | HRGMv2_4564_4_33 | 32635 | 35652 | + | GT39 |
Gene ID: HRGMv2_4564_4_31
Type: TC
Location: 30476 - 31051 (+)
Type: TC
Location: 30476 - 31051 (+)
Gene ID: HRGMv2_4564_4_32
Type: pfam
Location: 31147 - 32541 (+)
Type: pfam
Location: 31147 - 32541 (+)
Gene ID: HRGMv2_4564_4_33
Type: CAZyme
Location: 32635 - 35652 (+)
Type: CAZyme
Location: 32635 - 35652 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.