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Cluster: HRGMv2_4564_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4564_2 HRGMv2_4564_2_335 372258 373649 + 3.A.1.1.27
TC HRGMv2_4564_2 HRGMv2_4564_2_336 373652 374515 + 3.A.1.1.27
CAZyme HRGMv2_4564_2 HRGMv2_4564_2_337 374610 376571 + GH13_14
CAZyme HRGMv2_4564_2 HRGMv2_4564_2_338 376613 378622 + GH133
CAZyme HRGMv2_4564_2 HRGMv2_4564_2_339 378625 380247 + GH13_31
STP HRGMv2_4564_2 HRGMv2_4564_2_340 380322 381698 - HATPase_c | HisKA
TF HRGMv2_4564_2 HRGMv2_4564_2_341 381695 382399 - Trans_reg_C
TC HRGMv2_4564_2 HRGMv2_4564_2_342 382572 383495 + 3.A.1.131.1
Gene ID: HRGMv2_4564_2_335
Type: TC
Location: 372258 - 373649 (+)
Gene ID: HRGMv2_4564_2_336
Type: TC
Location: 373652 - 374515 (+)
Gene ID: HRGMv2_4564_2_337
Type: CAZyme
Location: 374610 - 376571 (+)
Gene ID: HRGMv2_4564_2_338
Type: CAZyme
Location: 376613 - 378622 (+)
Gene ID: HRGMv2_4564_2_339
Type: CAZyme
Location: 378625 - 380247 (+)
Gene ID: HRGMv2_4564_2_340
Type: STP
Location: 380322 - 381698 (-)
Gene ID: HRGMv2_4564_2_341
Type: TF
Location: 381695 - 382399 (-)
Gene ID: HRGMv2_4564_2_342
Type: TC
Location: 382572 - 383495 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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