Cluster: HRGMv2_4563_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4563
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4563_4 | HRGMv2_4563_4_14 | 11321 | 12280 | - | 2.A.19.5.2 |
| TF | HRGMv2_4563_4 | HRGMv2_4563_4_15 | 12715 | 13149 | + | MarR |
| NULL(UNKNOWN) | HRGMv2_4563_4 | HRGMv2_4563_4_16 | 13161 | 13577 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4563_4 | HRGMv2_4563_4_17 | 13587 | 14576 | + | GT2 |
Gene ID: HRGMv2_4563_4_14
Type: TC
Location: 11321 - 12280 (-)
Type: TC
Location: 11321 - 12280 (-)
Gene ID: HRGMv2_4563_4_15
Type: TF
Location: 12715 - 13149 (+)
Type: TF
Location: 12715 - 13149 (+)
Gene ID: HRGMv2_4563_4_16
Type:
Location: 13161 - 13577 (+)
Type:
Location: 13161 - 13577 (+)
Gene ID: HRGMv2_4563_4_17
Type: CAZyme
Location: 13587 - 14576 (+)
Type: CAZyme
Location: 13587 - 14576 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.