Cluster: HRGMv2_4563_CGC36
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4563
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4563_82 | HRGMv2_4563_82_1 | 2 | 304 | - | 3.A.1.3.20 |
| TC | HRGMv2_4563_82 | HRGMv2_4563_82_2 | 297 | 1121 | - | 3.A.1.3.20 |
| TC | HRGMv2_4563_82 | HRGMv2_4563_82_3 | 1199 | 2128 | - | 3.A.1.3.20 |
| TC | HRGMv2_4563_82 | HRGMv2_4563_82_4 | 2310 | 4049 | - | 2.A.114.1.3 |
| CAZyme | HRGMv2_4563_82 | HRGMv2_4563_82_5 | 4336 | 5904 | + | GH13_44 |
Gene ID: HRGMv2_4563_82_1
Type: TC
Location: 2 - 304 (-)
Type: TC
Location: 2 - 304 (-)
Gene ID: HRGMv2_4563_82_2
Type: TC
Location: 297 - 1121 (-)
Type: TC
Location: 297 - 1121 (-)
Gene ID: HRGMv2_4563_82_3
Type: TC
Location: 1199 - 2128 (-)
Type: TC
Location: 1199 - 2128 (-)
Gene ID: HRGMv2_4563_82_4
Type: TC
Location: 2310 - 4049 (-)
Type: TC
Location: 2310 - 4049 (-)
Gene ID: HRGMv2_4563_82_5
Type: CAZyme
Location: 4336 - 5904 (+)
Type: CAZyme
Location: 4336 - 5904 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.