Cluster: HRGMv2_4563_CGC35
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4563
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4563_74 | HRGMv2_4563_74_3 | 1449 | 3287 | - | GT2 | GT2 |
| pfam | HRGMv2_4563_74 | HRGMv2_4563_74_4 | 3357 | 3605 | - | FakA-like_M |
| CAZyme | HRGMv2_4563_74 | HRGMv2_4563_74_5 | 3618 | 5492 | - | GT2 | GT2 |
| TC | HRGMv2_4563_74 | HRGMv2_4563_74_6 | 5496 | 6272 | - | 3.A.1.103.1 |
| TC | HRGMv2_4563_74 | HRGMv2_4563_74_7 | 6285 | 7082 | - | 3.A.1.103.6 |
Gene ID: HRGMv2_4563_74_3
Type: CAZyme
Location: 1449 - 3287 (-)
Type: CAZyme
Location: 1449 - 3287 (-)
Gene ID: HRGMv2_4563_74_4
Type: pfam
Location: 3357 - 3605 (-)
Type: pfam
Location: 3357 - 3605 (-)
Gene ID: HRGMv2_4563_74_5
Type: CAZyme
Location: 3618 - 5492 (-)
Type: CAZyme
Location: 3618 - 5492 (-)
Gene ID: HRGMv2_4563_74_6
Type: TC
Location: 5496 - 6272 (-)
Type: TC
Location: 5496 - 6272 (-)
Gene ID: HRGMv2_4563_74_7
Type: TC
Location: 6285 - 7082 (-)
Type: TC
Location: 6285 - 7082 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.