Cluster: HRGMv2_4563_CGC33
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4563
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4563_69 | HRGMv2_4563_69_3 | 769 | 2652 | - | 3.A.1.106.3 |
| TC | HRGMv2_4563_69 | HRGMv2_4563_69_4 | 2645 | 4429 | - | 3.A.1.106.8 |
| peptidase | HRGMv2_4563_69 | HRGMv2_4563_69_5 | 4744 | 5589 | - | S09.UNW |
| CAZyme | HRGMv2_4563_69 | HRGMv2_4563_69_6 | 5604 | 7643 | - | GH31_1 |
Gene ID: HRGMv2_4563_69_3
Type: TC
Location: 769 - 2652 (-)
Type: TC
Location: 769 - 2652 (-)
Gene ID: HRGMv2_4563_69_4
Type: TC
Location: 2645 - 4429 (-)
Type: TC
Location: 2645 - 4429 (-)
Gene ID: HRGMv2_4563_69_5
Type: peptidase
Location: 4744 - 5589 (-)
Type: peptidase
Location: 4744 - 5589 (-)
Gene ID: HRGMv2_4563_69_6
Type: CAZyme
Location: 5604 - 7643 (-)
Type: CAZyme
Location: 5604 - 7643 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.