Cluster: HRGMv2_4563_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4563
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4563_58 | HRGMv2_4563_58_3 | 2013 | 3530 | + | GH77 |
| STP | HRGMv2_4563_58 | HRGMv2_4563_58_4 | 3647 | 4471 | + | GGDEF |
| NULL(UNKNOWN) | HRGMv2_4563_58 | HRGMv2_4563_58_5 | 4541 | 4972 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4563_58 | HRGMv2_4563_58_6 | 5029 | 6078 | - | 9.A.23.1.1 |
Gene ID: HRGMv2_4563_58_3
Type: CAZyme
Location: 2013 - 3530 (+)
Type: CAZyme
Location: 2013 - 3530 (+)
Gene ID: HRGMv2_4563_58_4
Type: STP
Location: 3647 - 4471 (+)
Type: STP
Location: 3647 - 4471 (+)
Gene ID: HRGMv2_4563_58_5
Type:
Location: 4541 - 4972 (+)
Type:
Location: 4541 - 4972 (+)
Gene ID: HRGMv2_4563_58_6
Type: TC
Location: 5029 - 6078 (-)
Type: TC
Location: 5029 - 6078 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.