Cluster: HRGMv2_4563_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4563
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4563_54 | HRGMv2_4563_54_5 | 4142 | 5953 | - | 3.A.1.135.6 |
| TC | HRGMv2_4563_54 | HRGMv2_4563_54_6 | 5955 | 8162 | - | 3.A.1.135.6 |
| TF | HRGMv2_4563_54 | HRGMv2_4563_54_7 | 8146 | 8661 | - | MarR |
| CAZyme | HRGMv2_4563_54 | HRGMv2_4563_54_8 | 8792 | 10285 | - | GH28 |
Gene ID: HRGMv2_4563_54_5
Type: TC
Location: 4142 - 5953 (-)
Type: TC
Location: 4142 - 5953 (-)
Gene ID: HRGMv2_4563_54_6
Type: TC
Location: 5955 - 8162 (-)
Type: TC
Location: 5955 - 8162 (-)
Gene ID: HRGMv2_4563_54_7
Type: TF
Location: 8146 - 8661 (-)
Type: TF
Location: 8146 - 8661 (-)
Gene ID: HRGMv2_4563_54_8
Type: CAZyme
Location: 8792 - 10285 (-)
Type: CAZyme
Location: 8792 - 10285 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.