Cluster: HRGMv2_4563_CGC27
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4563
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4563_47 | HRGMv2_4563_47_2 | 1118 | 2536 | + | GT5 |
| pfam | HRGMv2_4563_47 | HRGMv2_4563_47_3 | 2666 | 3415 | + | Peptidase_C39_2 |
| TC | HRGMv2_4563_47 | HRGMv2_4563_47_4 | 3940 | 5202 | + | 2.A.23.4.1 |
Gene ID: HRGMv2_4563_47_2
Type: CAZyme
Location: 1118 - 2536 (+)
Type: CAZyme
Location: 1118 - 2536 (+)
Gene ID: HRGMv2_4563_47_3
Type: pfam
Location: 2666 - 3415 (+)
Type: pfam
Location: 2666 - 3415 (+)
Gene ID: HRGMv2_4563_47_4
Type: TC
Location: 3940 - 5202 (+)
Type: TC
Location: 3940 - 5202 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.