Cluster: HRGMv2_4563_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4563
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4563_42 | HRGMv2_4563_42_1 | 66 | 2162 | + | GH25 |
| STP | HRGMv2_4563_42 | HRGMv2_4563_42_2 | 2215 | 2817 | - | TetR_N |
| peptidase | HRGMv2_4563_42 | HRGMv2_4563_42_3 | 2957 | 4249 | + | M38.UPW |
| TC | HRGMv2_4563_42 | HRGMv2_4563_42_4 | 4261 | 5607 | + | 2.A.2.3.3 |
Gene ID: HRGMv2_4563_42_1
Type: CAZyme
Location: 66 - 2162 (+)
Type: CAZyme
Location: 66 - 2162 (+)
Gene ID: HRGMv2_4563_42_2
Type: STP
Location: 2215 - 2817 (-)
Type: STP
Location: 2215 - 2817 (-)
Gene ID: HRGMv2_4563_42_3
Type: peptidase
Location: 2957 - 4249 (+)
Type: peptidase
Location: 2957 - 4249 (+)
Gene ID: HRGMv2_4563_42_4
Type: TC
Location: 4261 - 5607 (+)
Type: TC
Location: 4261 - 5607 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.