Cluster: HRGMv2_4563_CGC24
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4563
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4563_41 | HRGMv2_4563_41_5 | 5976 | 7703 | + | 8.A.59.2.1 |
| STP | HRGMv2_4563_41 | HRGMv2_4563_41_6 | 7687 | 8658 | + | Peripla_BP_1 |
| TC | HRGMv2_4563_41 | HRGMv2_4563_41_7 | 9042 | 10094 | + | 3.A.1.2.3 |
| TC | HRGMv2_4563_41 | HRGMv2_4563_41_8 | 10209 | 11717 | + | 3.A.1.2.3 |
| TC | HRGMv2_4563_41 | HRGMv2_4563_41_9 | 11733 | 12716 | + | 3.A.1.2.3 |
| NULL(UNKNOWN) | HRGMv2_4563_41 | HRGMv2_4563_41_10 | 12719 | 12916 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4563_41 | HRGMv2_4563_41_11 | 13093 | 13671 | - | Flavin_Reduct |
| CAZyme | HRGMv2_4563_41 | HRGMv2_4563_41_12 | 13668 | 14654 | - | GT2 |
Gene ID: HRGMv2_4563_41_5
Type: TC
Location: 5976 - 7703 (+)
Type: TC
Location: 5976 - 7703 (+)
Gene ID: HRGMv2_4563_41_6
Type: STP
Location: 7687 - 8658 (+)
Type: STP
Location: 7687 - 8658 (+)
Gene ID: HRGMv2_4563_41_7
Type: TC
Location: 9042 - 10094 (+)
Type: TC
Location: 9042 - 10094 (+)
Gene ID: HRGMv2_4563_41_8
Type: TC
Location: 10209 - 11717 (+)
Type: TC
Location: 10209 - 11717 (+)
Gene ID: HRGMv2_4563_41_9
Type: TC
Location: 11733 - 12716 (+)
Type: TC
Location: 11733 - 12716 (+)
Gene ID: HRGMv2_4563_41_10
Type:
Location: 12719 - 12916 (+)
Type:
Location: 12719 - 12916 (+)
Gene ID: HRGMv2_4563_41_11
Type: pfam
Location: 13093 - 13671 (-)
Type: pfam
Location: 13093 - 13671 (-)
Gene ID: HRGMv2_4563_41_12
Type: CAZyme
Location: 13668 - 14654 (-)
Type: CAZyme
Location: 13668 - 14654 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.