Cluster: HRGMv2_4563_CGC19
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4563
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4563_26 | HRGMv2_4563_26_2 | 807 | 1676 | - | CBM13 |
| TC | HRGMv2_4563_26 | HRGMv2_4563_26_3 | 1927 | 3855 | - | 3.A.1.135.5 |
| TC | HRGMv2_4563_26 | HRGMv2_4563_26_4 | 3855 | 5612 | - | 3.A.1.135.5 |
Gene ID: HRGMv2_4563_26_2
Type: CAZyme
Location: 807 - 1676 (-)
Type: CAZyme
Location: 807 - 1676 (-)
Gene ID: HRGMv2_4563_26_3
Type: TC
Location: 1927 - 3855 (-)
Type: TC
Location: 1927 - 3855 (-)
Gene ID: HRGMv2_4563_26_4
Type: TC
Location: 3855 - 5612 (-)
Type: TC
Location: 3855 - 5612 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.