Cluster: HRGMv2_4558_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4558
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4558_8 | HRGMv2_4558_8_35 | 28884 | 30173 | + | 3.A.1.1.28 |
| TC | HRGMv2_4558_8 | HRGMv2_4558_8_36 | 30170 | 31048 | + | 3.A.1.1.28 |
| TC | HRGMv2_4558_8 | HRGMv2_4558_8_37 | 31045 | 31953 | + | 3.A.1.1.28 |
| CAZyme | HRGMv2_4558_8 | HRGMv2_4558_8_38 | 32015 | 33424 | + | GH13_18 |
| CAZyme | HRGMv2_4558_8 | HRGMv2_4558_8_39 | 33437 | 35626 | + | GH36 |
Gene ID: HRGMv2_4558_8_35
Type: TC
Location: 28884 - 30173 (+)
Type: TC
Location: 28884 - 30173 (+)
Gene ID: HRGMv2_4558_8_36
Type: TC
Location: 30170 - 31048 (+)
Type: TC
Location: 30170 - 31048 (+)
Gene ID: HRGMv2_4558_8_37
Type: TC
Location: 31045 - 31953 (+)
Type: TC
Location: 31045 - 31953 (+)
Gene ID: HRGMv2_4558_8_38
Type: CAZyme
Location: 32015 - 33424 (+)
Type: CAZyme
Location: 32015 - 33424 (+)
Gene ID: HRGMv2_4558_8_39
Type: CAZyme
Location: 33437 - 35626 (+)
Type: CAZyme
Location: 33437 - 35626 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp934481445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.