Cluster: HRGMv2_4558_CGC27
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4558
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4558_94 | HRGMv2_4558_94_3 | 2116 | 4188 | + | 3.A.11.1.3 |
| CAZyme | HRGMv2_4558_94 | HRGMv2_4558_94_4 | 4206 | 5789 | + | GH26 |
| NULL(UNKNOWN) | HRGMv2_4558_94 | HRGMv2_4558_94_5 | 5873 | 6400 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4558_94 | HRGMv2_4558_94_6 | 6521 | 7867 | + | CE17 |
Gene ID: HRGMv2_4558_94_3
Type: TC
Location: 2116 - 4188 (+)
Type: TC
Location: 2116 - 4188 (+)
Gene ID: HRGMv2_4558_94_4
Type: CAZyme
Location: 4206 - 5789 (+)
Type: CAZyme
Location: 4206 - 5789 (+)
Gene ID: HRGMv2_4558_94_5
Type:
Location: 5873 - 6400 (+)
Type:
Location: 5873 - 6400 (+)
Gene ID: HRGMv2_4558_94_6
Type: CAZyme
Location: 6521 - 7867 (+)
Type: CAZyme
Location: 6521 - 7867 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp934481445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.