Cluster: HRGMv2_4558_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4558
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4558_16 | HRGMv2_4558_16_25 | 30389 | 31606 | + | GH27 |
| NULL(UNKNOWN) | HRGMv2_4558_16 | HRGMv2_4558_16_26 | 31606 | 31809 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4558_16 | HRGMv2_4558_16_27 | 31831 | 33198 | + | GH26 |
| STP | HRGMv2_4558_16 | HRGMv2_4558_16_28 | 33244 | 35178 | - | GGDEF | Peripla_BP_3 |
| TC | HRGMv2_4558_16 | HRGMv2_4558_16_29 | 35228 | 36244 | - | 9.B.157.1.1 |
Gene ID: HRGMv2_4558_16_25
Type: CAZyme
Location: 30389 - 31606 (+)
Type: CAZyme
Location: 30389 - 31606 (+)
Gene ID: HRGMv2_4558_16_26
Type:
Location: 31606 - 31809 (+)
Type:
Location: 31606 - 31809 (+)
Gene ID: HRGMv2_4558_16_27
Type: CAZyme
Location: 31831 - 33198 (+)
Type: CAZyme
Location: 31831 - 33198 (+)
Gene ID: HRGMv2_4558_16_28
Type: STP
Location: 33244 - 35178 (-)
Type: STP
Location: 33244 - 35178 (-)
Gene ID: HRGMv2_4558_16_29
Type: TC
Location: 35228 - 36244 (-)
Type: TC
Location: 35228 - 36244 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp934481445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.