Cluster: HRGMv2_4553_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4553
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4553_5 | HRGMv2_4553_5_66 | 70943 | 73258 | + | CBM80 | GH5_4 |
| pfam | HRGMv2_4553_5 | HRGMv2_4553_5_67 | 73589 | 74299 | + | CpsB_CapC |
| TC | HRGMv2_4553_5 | HRGMv2_4553_5_68 | 74343 | 76313 | + | 9.B.18.2.1 |
Gene ID: HRGMv2_4553_5_66
Type: CAZyme
Location: 70943 - 73258 (+)
Type: CAZyme
Location: 70943 - 73258 (+)
Gene ID: HRGMv2_4553_5_67
Type: pfam
Location: 73589 - 74299 (+)
Type: pfam
Location: 73589 - 74299 (+)
Gene ID: HRGMv2_4553_5_68
Type: TC
Location: 74343 - 76313 (+)
Type: TC
Location: 74343 - 76313 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.