Cluster: HRGMv2_4553_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4553
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4553_4 | HRGMv2_4553_4_30 | 32498 | 34468 | + | CBM35 | GH26 |
| CAZyme | HRGMv2_4553_4 | HRGMv2_4553_4_31 | 34504 | 37236 | + | GH9 |
| TC | HRGMv2_4553_4 | HRGMv2_4553_4_32 | 37349 | 38791 | + | 3.A.16.1.2 |
Gene ID: HRGMv2_4553_4_30
Type: CAZyme
Location: 32498 - 34468 (+)
Type: CAZyme
Location: 32498 - 34468 (+)
Gene ID: HRGMv2_4553_4_31
Type: CAZyme
Location: 34504 - 37236 (+)
Type: CAZyme
Location: 34504 - 37236 (+)
Gene ID: HRGMv2_4553_4_32
Type: TC
Location: 37349 - 38791 (+)
Type: TC
Location: 37349 - 38791 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.