Cluster: HRGMv2_4553_CGC37
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4553
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4553_99 | HRGMv2_4553_99_2 | 3360 | 5909 | + | CBM32 | GH43_24 |
| STP | HRGMv2_4553_99 | HRGMv2_4553_99_3 | 6110 | 7555 | + | GGDEF |
| pfam | HRGMv2_4553_99 | HRGMv2_4553_99_4 | 7632 | 8582 | - | cobW | DUF1980_C |
| TC | HRGMv2_4553_99 | HRGMv2_4553_99_5 | 8579 | 9685 | - | 9.B.10.1.1 |
Gene ID: HRGMv2_4553_99_2
Type: CAZyme
Location: 3360 - 5909 (+)
Type: CAZyme
Location: 3360 - 5909 (+)
Gene ID: HRGMv2_4553_99_3
Type: STP
Location: 6110 - 7555 (+)
Type: STP
Location: 6110 - 7555 (+)
Gene ID: HRGMv2_4553_99_4
Type: pfam
Location: 7632 - 8582 (-)
Type: pfam
Location: 7632 - 8582 (-)
Gene ID: HRGMv2_4553_99_5
Type: TC
Location: 8579 - 9685 (-)
Type: TC
Location: 8579 - 9685 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.