Cluster: HRGMv2_4553_CGC36
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4553
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4553_95 | HRGMv2_4553_95_1 | 218 | 1171 | + | GH5_37 |
| NULL(UNKNOWN) | HRGMv2_4553_95 | HRGMv2_4553_95_2 | 1219 | 3183 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_4553_95 | HRGMv2_4553_95_3 | 3196 | 3756 | - | Sigma70_r2 | Sigma70_r4_2 |
| TC | HRGMv2_4553_95 | HRGMv2_4553_95_4 | 4043 | 4678 | + | 9.B.31.1.2 |
| TC | HRGMv2_4553_95 | HRGMv2_4553_95_5 | 4762 | 6117 | + | 2.A.66.1.33 |
Gene ID: HRGMv2_4553_95_1
Type: CAZyme
Location: 218 - 1171 (+)
Type: CAZyme
Location: 218 - 1171 (+)
Gene ID: HRGMv2_4553_95_2
Type:
Location: 1219 - 3183 (-)
Type:
Location: 1219 - 3183 (-)
Gene ID: HRGMv2_4553_95_3
Type: STP
Location: 3196 - 3756 (-)
Type: STP
Location: 3196 - 3756 (-)
Gene ID: HRGMv2_4553_95_4
Type: TC
Location: 4043 - 4678 (+)
Type: TC
Location: 4043 - 4678 (+)
Gene ID: HRGMv2_4553_95_5
Type: TC
Location: 4762 - 6117 (+)
Type: TC
Location: 4762 - 6117 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.