Cluster: HRGMv2_4553_CGC31
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4553
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4553_62 | HRGMv2_4553_62_4 | 4467 | 7568 | - | CBM4 | GH9 |
| CAZyme | HRGMv2_4553_62 | HRGMv2_4553_62_5 | 7894 | 10452 | - | CBM3 | GH9 |
| peptidase | HRGMv2_4553_62 | HRGMv2_4553_62_6 | 11062 | 11772 | + | S14.UPW |
| TC | HRGMv2_4553_62 | HRGMv2_4553_62_7 | 11864 | 14452 | + | 3.A.12.1.1 |
Gene ID: HRGMv2_4553_62_4
Type: CAZyme
Location: 4467 - 7568 (-)
Type: CAZyme
Location: 4467 - 7568 (-)
Gene ID: HRGMv2_4553_62_5
Type: CAZyme
Location: 7894 - 10452 (-)
Type: CAZyme
Location: 7894 - 10452 (-)
Gene ID: HRGMv2_4553_62_6
Type: peptidase
Location: 11062 - 11772 (+)
Type: peptidase
Location: 11062 - 11772 (+)
Gene ID: HRGMv2_4553_62_7
Type: TC
Location: 11864 - 14452 (+)
Type: TC
Location: 11864 - 14452 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.