Cluster: HRGMv2_4553_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4553
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4553_59 | HRGMv2_4553_59_4 | 3272 | 4210 | - | 2.A.19.5.2 |
| TC | HRGMv2_4553_59 | HRGMv2_4553_59_5 | 4603 | 5952 | + | 2.A.45.2.2 |
| TC | HRGMv2_4553_59 | HRGMv2_4553_59_6 | 5973 | 6569 | + | 2.A.115.2.14 |
| CAZyme | HRGMv2_4553_59 | HRGMv2_4553_59_7 | 6930 | 9167 | - | CBM35 | CBM80 | GH26 |
Gene ID: HRGMv2_4553_59_4
Type: TC
Location: 3272 - 4210 (-)
Type: TC
Location: 3272 - 4210 (-)
Gene ID: HRGMv2_4553_59_5
Type: TC
Location: 4603 - 5952 (+)
Type: TC
Location: 4603 - 5952 (+)
Gene ID: HRGMv2_4553_59_6
Type: TC
Location: 5973 - 6569 (+)
Type: TC
Location: 5973 - 6569 (+)
Gene ID: HRGMv2_4553_59_7
Type: CAZyme
Location: 6930 - 9167 (-)
Type: CAZyme
Location: 6930 - 9167 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.