Cluster: HRGMv2_4553_CGC28
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4553
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4553_57 | HRGMv2_4553_57_11 | 6997 | 8298 | + | 9.B.34.1.3 |
| NULL(UNKNOWN) | HRGMv2_4553_57 | HRGMv2_4553_57_12 | 8485 | 10827 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4553_57 | HRGMv2_4553_57_13 | 10901 | 13261 | - | GH9 |
Gene ID: HRGMv2_4553_57_11
Type: TC
Location: 6997 - 8298 (+)
Type: TC
Location: 6997 - 8298 (+)
Gene ID: HRGMv2_4553_57_12
Type:
Location: 8485 - 10827 (+)
Type:
Location: 8485 - 10827 (+)
Gene ID: HRGMv2_4553_57_13
Type: CAZyme
Location: 10901 - 13261 (-)
Type: CAZyme
Location: 10901 - 13261 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.