Cluster: HRGMv2_4553_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4553
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4553_48 | HRGMv2_4553_48_4 | 2062 | 4770 | - | CBM4 | GH9 |
| pfam | HRGMv2_4553_48 | HRGMv2_4553_48_5 | 5058 | 5642 | + | Guanylate_kin |
| TC | HRGMv2_4553_48 | HRGMv2_4553_48_6 | 5686 | 7212 | + | 9.B.18.2.1 |
| TC | HRGMv2_4553_48 | HRGMv2_4553_48_7 | 7365 | 8282 | + | 1.A.23.4.3 |
Gene ID: HRGMv2_4553_48_4
Type: CAZyme
Location: 2062 - 4770 (-)
Type: CAZyme
Location: 2062 - 4770 (-)
Gene ID: HRGMv2_4553_48_5
Type: pfam
Location: 5058 - 5642 (+)
Type: pfam
Location: 5058 - 5642 (+)
Gene ID: HRGMv2_4553_48_6
Type: TC
Location: 5686 - 7212 (+)
Type: TC
Location: 5686 - 7212 (+)
Gene ID: HRGMv2_4553_48_7
Type: TC
Location: 7365 - 8282 (+)
Type: TC
Location: 7365 - 8282 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.