Cluster: HRGMv2_4553_CGC14
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4553
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4553_11 | HRGMv2_4553_11_37 | 35878 | 36627 | - | 3.A.1.132.1 |
| TC | HRGMv2_4553_11 | HRGMv2_4553_11_38 | 36630 | 37673 | - | 3.A.1.132.4 |
| CAZyme | HRGMv2_4553_11 | HRGMv2_4553_11_39 | 38253 | 40829 | + | GH48 |
Gene ID: HRGMv2_4553_11_37
Type: TC
Location: 35878 - 36627 (-)
Type: TC
Location: 35878 - 36627 (-)
Gene ID: HRGMv2_4553_11_38
Type: TC
Location: 36630 - 37673 (-)
Type: TC
Location: 36630 - 37673 (-)
Gene ID: HRGMv2_4553_11_39
Type: CAZyme
Location: 38253 - 40829 (+)
Type: CAZyme
Location: 38253 - 40829 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.