Cluster: HRGMv2_4553_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4553
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4553_10 | HRGMv2_4553_10_42 | 46679 | 49276 | + | 3.A.9.1.2 |
| CAZyme | HRGMv2_4553_10 | HRGMv2_4553_10_43 | 49620 | 52217 | - | CBM62 | CBM62 | GH30_5 |
| TC | HRGMv2_4553_10 | HRGMv2_4553_10_44 | 52563 | 53267 | + | 3.A.1.122.7 |
Gene ID: HRGMv2_4553_10_42
Type: TC
Location: 46679 - 49276 (+)
Type: TC
Location: 46679 - 49276 (+)
Gene ID: HRGMv2_4553_10_43
Type: CAZyme
Location: 49620 - 52217 (-)
Type: CAZyme
Location: 49620 - 52217 (-)
Gene ID: HRGMv2_4553_10_44
Type: TC
Location: 52563 - 53267 (+)
Type: TC
Location: 52563 - 53267 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.