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Cluster: HRGMv2_4550_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4550_4 HRGMv2_4550_4_56 51116 52474 + 3.B.1.1.5
pfam HRGMv2_4550_4 HRGMv2_4550_4_57 52523 52906 + Biotin_lipoyl | Biotin_lipoyl_2
TC HRGMv2_4550_4 HRGMv2_4550_4_58 52979 54376 + 3.B.1.1.6
TC HRGMv2_4550_4 HRGMv2_4550_4_59 54535 55392 + 2.A.115.1.1
pfam HRGMv2_4550_4 HRGMv2_4550_4_60 55530 56336 - VCA0040-like
TC HRGMv2_4550_4 HRGMv2_4550_4_61 56593 57645 + 2.A.20.1.5
pfam HRGMv2_4550_4 HRGMv2_4550_4_62 57682 58305 + PhoU_div
pfam HRGMv2_4550_4 HRGMv2_4550_4_63 58398 59771 + Aldedh
TC HRGMv2_4550_4 HRGMv2_4550_4_64 60039 60803 + 3.A.1.122.2
pfam HRGMv2_4550_4 HRGMv2_4550_4_65 60857 62932 + CARDB
TC HRGMv2_4550_4 HRGMv2_4550_4_66 62929 64251 + 3.A.1.122.2
pfam HRGMv2_4550_4 HRGMv2_4550_4_67 64370 65620 + MOFRL | DUF4147
CAZyme HRGMv2_4550_4 HRGMv2_4550_4_68 65649 66662 + CE19
pfam HRGMv2_4550_4 HRGMv2_4550_4_69 66766 67551 + SseB | SseB_C
TC HRGMv2_4550_4 HRGMv2_4550_4_70 67782 69797 - 9.A.8.1.6
TC HRGMv2_4550_4 HRGMv2_4550_4_71 69824 70057 - 9.A.8.1.6
TC HRGMv2_4550_4 HRGMv2_4550_4_72 70378 72213 + 3.A.16.1.2
Gene ID: HRGMv2_4550_4_56
Type: TC
Location: 51116 - 52474 (+)
Gene ID: HRGMv2_4550_4_57
Type: pfam
Location: 52523 - 52906 (+)
Gene ID: HRGMv2_4550_4_58
Type: TC
Location: 52979 - 54376 (+)
Gene ID: HRGMv2_4550_4_59
Type: TC
Location: 54535 - 55392 (+)
Gene ID: HRGMv2_4550_4_60
Type: pfam
Location: 55530 - 56336 (-)
Gene ID: HRGMv2_4550_4_61
Type: TC
Location: 56593 - 57645 (+)
Gene ID: HRGMv2_4550_4_62
Type: pfam
Location: 57682 - 58305 (+)
Gene ID: HRGMv2_4550_4_63
Type: pfam
Location: 58398 - 59771 (+)
Gene ID: HRGMv2_4550_4_64
Type: TC
Location: 60039 - 60803 (+)
Gene ID: HRGMv2_4550_4_65
Type: pfam
Location: 60857 - 62932 (+)
Gene ID: HRGMv2_4550_4_66
Type: TC
Location: 62929 - 64251 (+)
Gene ID: HRGMv2_4550_4_67
Type: pfam
Location: 64370 - 65620 (+)
Gene ID: HRGMv2_4550_4_68
Type: CAZyme
Location: 65649 - 66662 (+)
Gene ID: HRGMv2_4550_4_69
Type: pfam
Location: 66766 - 67551 (+)
Gene ID: HRGMv2_4550_4_70
Type: TC
Location: 67782 - 69797 (-)
Gene ID: HRGMv2_4550_4_71
Type: TC
Location: 69824 - 70057 (-)
Gene ID: HRGMv2_4550_4_72
Type: TC
Location: 70378 - 72213 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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