Cluster: HRGMv2_4550_CGC36
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4550
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4550_55 | HRGMv2_4550_55_1 | 3 | 1943 | - | GH36 |
| TF | HRGMv2_4550_55 | HRGMv2_4550_55_2 | 2089 | 4344 | - | HTH_AraC |
| TC | HRGMv2_4550_55 | HRGMv2_4550_55_3 | 4425 | 5318 | - | 3.A.1.1.29 |
| TC | HRGMv2_4550_55 | HRGMv2_4550_55_4 | 5327 | 6298 | - | 3.A.1.1.10 |
Gene ID: HRGMv2_4550_55_1
Type: CAZyme
Location: 3 - 1943 (-)
Type: CAZyme
Location: 3 - 1943 (-)
Gene ID: HRGMv2_4550_55_2
Type: TF
Location: 2089 - 4344 (-)
Type: TF
Location: 2089 - 4344 (-)
Gene ID: HRGMv2_4550_55_3
Type: TC
Location: 4425 - 5318 (-)
Type: TC
Location: 4425 - 5318 (-)
Gene ID: HRGMv2_4550_55_4
Type: TC
Location: 5327 - 6298 (-)
Type: TC
Location: 5327 - 6298 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp934869045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.