Cluster: HRGMv2_4550_CGC33
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4550
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4550_46 | HRGMv2_4550_46_14 | 11721 | 12425 | - | 3.A.1.122.7 |
| NULL(UNKNOWN) | HRGMv2_4550_46 | HRGMv2_4550_46_15 | 12692 | 12823 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4550_46 | HRGMv2_4550_46_16 | 13010 | 14008 | + | HlyD_3 | HlyD_D23 |
| TC | HRGMv2_4550_46 | HRGMv2_4550_46_17 | 14020 | 15201 | + | 3.A.1.122.2 |
| CAZyme | HRGMv2_4550_46 | HRGMv2_4550_46_18 | 15317 | 16342 | - | GH177 |
Gene ID: HRGMv2_4550_46_14
Type: TC
Location: 11721 - 12425 (-)
Type: TC
Location: 11721 - 12425 (-)
Gene ID: HRGMv2_4550_46_15
Type:
Location: 12692 - 12823 (-)
Type:
Location: 12692 - 12823 (-)
Gene ID: HRGMv2_4550_46_16
Type: pfam
Location: 13010 - 14008 (+)
Type: pfam
Location: 13010 - 14008 (+)
Gene ID: HRGMv2_4550_46_17
Type: TC
Location: 14020 - 15201 (+)
Type: TC
Location: 14020 - 15201 (+)
Gene ID: HRGMv2_4550_46_18
Type: CAZyme
Location: 15317 - 16342 (-)
Type: CAZyme
Location: 15317 - 16342 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp934869045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.