Cluster: HRGMv2_4550_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4550
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4550_23 | HRGMv2_4550_23_18 | 17430 | 18833 | - | 2.A.66.1.45 |
| CAZyme | HRGMv2_4550_23 | HRGMv2_4550_23_19 | 19118 | 20254 | - | CE9 |
| TF | HRGMv2_4550_23 | HRGMv2_4550_23_20 | 20500 | 22362 | + | 0043935 |
| TC | HRGMv2_4550_23 | HRGMv2_4550_23_21 | 22378 | 23982 | + | 2.A.15.2.3 |
| peptidase | HRGMv2_4550_23 | HRGMv2_4550_23_22 | 24046 | 25533 | - | S12.UPW |
| CAZyme | HRGMv2_4550_23 | HRGMv2_4550_23_23 | 25592 | 27667 | - | GH42 |
Gene ID: HRGMv2_4550_23_18
Type: TC
Location: 17430 - 18833 (-)
Type: TC
Location: 17430 - 18833 (-)
Gene ID: HRGMv2_4550_23_19
Type: CAZyme
Location: 19118 - 20254 (-)
Type: CAZyme
Location: 19118 - 20254 (-)
Gene ID: HRGMv2_4550_23_20
Type: TF
Location: 20500 - 22362 (+)
Type: TF
Location: 20500 - 22362 (+)
Gene ID: HRGMv2_4550_23_21
Type: TC
Location: 22378 - 23982 (+)
Type: TC
Location: 22378 - 23982 (+)
Gene ID: HRGMv2_4550_23_22
Type: peptidase
Location: 24046 - 25533 (-)
Type: peptidase
Location: 24046 - 25533 (-)
Gene ID: HRGMv2_4550_23_23
Type: CAZyme
Location: 25592 - 27667 (-)
Type: CAZyme
Location: 25592 - 27667 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp934869045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.