Cluster: HRGMv2_4550_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4550
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4550_20 | HRGMv2_4550_20_3 | 1397 | 2704 | - | GH4 |
| TF | HRGMv2_4550_20 | HRGMv2_4550_20_4 | 2919 | 3779 | + | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | HRGMv2_4550_20 | HRGMv2_4550_20_5 | 3776 | 3934 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4550_20 | HRGMv2_4550_20_6 | 4031 | 5107 | + | 1.A.23.4.2 |
Gene ID: HRGMv2_4550_20_3
Type: CAZyme
Location: 1397 - 2704 (-)
Type: CAZyme
Location: 1397 - 2704 (-)
Gene ID: HRGMv2_4550_20_4
Type: TF
Location: 2919 - 3779 (+)
Type: TF
Location: 2919 - 3779 (+)
Gene ID: HRGMv2_4550_20_5
Type:
Location: 3776 - 3934 (-)
Type:
Location: 3776 - 3934 (-)
Gene ID: HRGMv2_4550_20_6
Type: TC
Location: 4031 - 5107 (+)
Type: TC
Location: 4031 - 5107 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp934869045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.