Cluster: HRGMv2_4550_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4550
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4550_12 | HRGMv2_4550_12_54 | 60355 | 61320 | + | 3.A.1.1.10 |
| TC | HRGMv2_4550_12 | HRGMv2_4550_12_55 | 61336 | 62235 | + | 3.A.1.1.29 |
| STP | HRGMv2_4550_12 | HRGMv2_4550_12_56 | 62254 | 63807 | + | SBP_bac_1 |
| CAZyme | HRGMv2_4550_12 | HRGMv2_4550_12_57 | 63904 | 65985 | + | GH50 |
| CAZyme | HRGMv2_4550_12 | HRGMv2_4550_12_58 | 66000 | 66824 | + | GH16 |
Gene ID: HRGMv2_4550_12_54
Type: TC
Location: 60355 - 61320 (+)
Type: TC
Location: 60355 - 61320 (+)
Gene ID: HRGMv2_4550_12_55
Type: TC
Location: 61336 - 62235 (+)
Type: TC
Location: 61336 - 62235 (+)
Gene ID: HRGMv2_4550_12_56
Type: STP
Location: 62254 - 63807 (+)
Type: STP
Location: 62254 - 63807 (+)
Gene ID: HRGMv2_4550_12_57
Type: CAZyme
Location: 63904 - 65985 (+)
Type: CAZyme
Location: 63904 - 65985 (+)
Gene ID: HRGMv2_4550_12_58
Type: CAZyme
Location: 66000 - 66824 (+)
Type: CAZyme
Location: 66000 - 66824 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp934869045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.