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Cluster: HRGMv2_4539_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4539_6 HRGMv2_4539_6_46 61881 62639 - 3.A.1.3.10
TC HRGMv2_4539_6 HRGMv2_4539_6_47 62650 63303 - 3.A.1.3.12
TC HRGMv2_4539_6 HRGMv2_4539_6_48 63325 64122 - 3.A.1.3.15
TC HRGMv2_4539_6 HRGMv2_4539_6_49 64508 65299 + 3.A.1.3.27
TC HRGMv2_4539_6 HRGMv2_4539_6_50 65380 66081 + 3.A.1.3.15
TC HRGMv2_4539_6 HRGMv2_4539_6_51 66068 66793 + 3.A.1.3.25
pfam HRGMv2_4539_6 HRGMv2_4539_6_52 66795 67226 + Acetyltransf_1 | FR47 | Acetyltransf_7 | Acetyltransf_10
CAZyme HRGMv2_4539_6 HRGMv2_4539_6_53 67268 69913 + CBM4 | GH9
pfam HRGMv2_4539_6 HRGMv2_4539_6_54 70060 70932 + Patatin | DUF6363
CAZyme HRGMv2_4539_6 HRGMv2_4539_6_55 70962 71651 - CE4
Gene ID: HRGMv2_4539_6_46
Type: TC
Location: 61881 - 62639 (-)
Gene ID: HRGMv2_4539_6_47
Type: TC
Location: 62650 - 63303 (-)
Gene ID: HRGMv2_4539_6_48
Type: TC
Location: 63325 - 64122 (-)
Gene ID: HRGMv2_4539_6_49
Type: TC
Location: 64508 - 65299 (+)
Gene ID: HRGMv2_4539_6_50
Type: TC
Location: 65380 - 66081 (+)
Gene ID: HRGMv2_4539_6_51
Type: TC
Location: 66068 - 66793 (+)
Gene ID: HRGMv2_4539_6_52
Type: pfam
Location: 66795 - 67226 (+)
Gene ID: HRGMv2_4539_6_53
Type: CAZyme
Location: 67268 - 69913 (+)
Gene ID: HRGMv2_4539_6_54
Type: pfam
Location: 70060 - 70932 (+)
Gene ID: HRGMv2_4539_6_55
Type: CAZyme
Location: 70962 - 71651 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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