Cluster: HRGMv2_4539_CGC32
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4539
- CGC Family ID: CGCFAM_01800
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4539_46 | HRGMv2_4539_46_4 | 2233 | 2655 | + | 1.E.19.1.10 |
| peptidase | HRGMv2_4539_46 | HRGMv2_4539_46_5 | 2657 | 3307 | + | M15.UNA |
| CAZyme | HRGMv2_4539_46 | HRGMv2_4539_46_6 | 3304 | 3873 | + | GH25 |
Gene ID: HRGMv2_4539_46_4
Type: TC
Location: 2233 - 2655 (+)
Type: TC
Location: 2233 - 2655 (+)
Gene ID: HRGMv2_4539_46_5
Type: peptidase
Location: 2657 - 3307 (+)
Type: peptidase
Location: 2657 - 3307 (+)
Gene ID: HRGMv2_4539_46_6
Type: CAZyme
Location: 3304 - 3873 (+)
Type: CAZyme
Location: 3304 - 3873 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp019417665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.