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Cluster: HRGMv2_4539_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4539_44 HRGMv2_4539_44_2 1415 2707 + 3.A.1.1.28
TC HRGMv2_4539_44 HRGMv2_4539_44_3 2704 3597 + 3.A.1.1.28
TC HRGMv2_4539_44 HRGMv2_4539_44_4 3594 4502 + 3.A.1.1.28
CAZyme HRGMv2_4539_44 HRGMv2_4539_44_5 4589 6007 + GH13_18
CAZyme HRGMv2_4539_44 HRGMv2_4539_44_6 6013 8211 + GH36
Gene ID: HRGMv2_4539_44_2
Type: TC
Location: 1415 - 2707 (+)
Gene ID: HRGMv2_4539_44_3
Type: TC
Location: 2704 - 3597 (+)
Gene ID: HRGMv2_4539_44_4
Type: TC
Location: 3594 - 4502 (+)
Gene ID: HRGMv2_4539_44_5
Type: CAZyme
Location: 4589 - 6007 (+)
Gene ID: HRGMv2_4539_44_6
Type: CAZyme
Location: 6013 - 8211 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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