Cluster: HRGMv2_4539_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4539
- CGC Family ID: CGCFAM_06570
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4539_43 | HRGMv2_4539_43_9 | 8613 | 9911 | + | 2.A.38.4.3 |
| TC | HRGMv2_4539_43 | HRGMv2_4539_43_10 | 9946 | 10656 | + | 2.A.38.4.2 |
| TC | HRGMv2_4539_43 | HRGMv2_4539_43_11 | 10909 | 12579 | - | 3.A.1.5.25 |
| CAZyme | HRGMv2_4539_43 | HRGMv2_4539_43_12 | 12906 | 16412 | + | CBM22 | CBM22 | CBM9 | GH10 |
Gene ID: HRGMv2_4539_43_9
Type: TC
Location: 8613 - 9911 (+)
Type: TC
Location: 8613 - 9911 (+)
Gene ID: HRGMv2_4539_43_10
Type: TC
Location: 9946 - 10656 (+)
Type: TC
Location: 9946 - 10656 (+)
Gene ID: HRGMv2_4539_43_11
Type: TC
Location: 10909 - 12579 (-)
Type: TC
Location: 10909 - 12579 (-)
Gene ID: HRGMv2_4539_43_12
Type: CAZyme
Location: 12906 - 16412 (+)
Type: CAZyme
Location: 12906 - 16412 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp019417665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.