Cluster: HRGMv2_4539_CGC26
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4539
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4539_31 | HRGMv2_4539_31_19 | 22639 | 23607 | - | GT2 |
| STP | HRGMv2_4539_31 | HRGMv2_4539_31_20 | 23827 | 24333 | - | NUDIX |
| NULL(UNKNOWN) | HRGMv2_4539_31 | HRGMv2_4539_31_21 | 24653 | 25060 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4539_31 | HRGMv2_4539_31_22 | 25069 | 25920 | + | 1.E.12.1.3 |
Gene ID: HRGMv2_4539_31_19
Type: CAZyme
Location: 22639 - 23607 (-)
Type: CAZyme
Location: 22639 - 23607 (-)
Gene ID: HRGMv2_4539_31_20
Type: STP
Location: 23827 - 24333 (-)
Type: STP
Location: 23827 - 24333 (-)
Gene ID: HRGMv2_4539_31_21
Type:
Location: 24653 - 25060 (+)
Type:
Location: 24653 - 25060 (+)
Gene ID: HRGMv2_4539_31_22
Type: TC
Location: 25069 - 25920 (+)
Type: TC
Location: 25069 - 25920 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp019417665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.