Cluster: HRGMv2_4539_CGC25
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4539
- CGC Family ID: CGCFAM_00621
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4539_28 | HRGMv2_4539_28_21 | 21261 | 24071 | + | CBM4 |
| pfam | HRGMv2_4539_28 | HRGMv2_4539_28_22 | 24182 | 25084 | - | ABC2_membrane | ABC2_membrane_3 |
| TC | HRGMv2_4539_28 | HRGMv2_4539_28_23 | 25081 | 26001 | - | 3.A.1.105.9 |
Gene ID: HRGMv2_4539_28_21
Type: CAZyme
Location: 21261 - 24071 (+)
Type: CAZyme
Location: 21261 - 24071 (+)
Gene ID: HRGMv2_4539_28_22
Type: pfam
Location: 24182 - 25084 (-)
Type: pfam
Location: 24182 - 25084 (-)
Gene ID: HRGMv2_4539_28_23
Type: TC
Location: 25081 - 26001 (-)
Type: TC
Location: 25081 - 26001 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp019417665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.