Cluster: HRGMv2_4539_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4539
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4539_16 | HRGMv2_4539_16_11 | 12872 | 13900 | + | 9.B.146.1.3 |
| TC | HRGMv2_4539_16 | HRGMv2_4539_16_12 | 14102 | 15352 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_4539_16 | HRGMv2_4539_16_13 | 15349 | 16473 | + | GT28 |
Gene ID: HRGMv2_4539_16_11
Type: TC
Location: 12872 - 13900 (+)
Type: TC
Location: 12872 - 13900 (+)
Gene ID: HRGMv2_4539_16_12
Type: TC
Location: 14102 - 15352 (+)
Type: TC
Location: 14102 - 15352 (+)
Gene ID: HRGMv2_4539_16_13
Type: CAZyme
Location: 15349 - 16473 (+)
Type: CAZyme
Location: 15349 - 16473 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp019417665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.