Cluster: HRGMv2_4539_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4539
- CGC Family ID: CGCFAM_01097
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4539_14 | HRGMv2_4539_14_26 | 19000 | 21324 | + | GH95 |
| CAZyme | HRGMv2_4539_14 | HRGMv2_4539_14_27 | 21585 | 23156 | + | GH26 |
| TC | HRGMv2_4539_14 | HRGMv2_4539_14_28 | 23217 | 25088 | - | 3.A.3.6.10 |
Gene ID: HRGMv2_4539_14_26
Type: CAZyme
Location: 19000 - 21324 (+)
Type: CAZyme
Location: 19000 - 21324 (+)
Gene ID: HRGMv2_4539_14_27
Type: CAZyme
Location: 21585 - 23156 (+)
Type: CAZyme
Location: 21585 - 23156 (+)
Gene ID: HRGMv2_4539_14_28
Type: TC
Location: 23217 - 25088 (-)
Type: TC
Location: 23217 - 25088 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp019417665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.