Cluster: HRGMv2_4539_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4539
- CGC Family ID: CGCFAM_01058
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4539_1 | HRGMv2_4539_1_8 | 8606 | 10651 | + | GH42 |
| CAZyme | HRGMv2_4539_1 | HRGMv2_4539_1_9 | 10684 | 12975 | + | GH3 |
| TC | HRGMv2_4539_1 | HRGMv2_4539_1_10 | 13344 | 14942 | - | 3.A.1.121.4 |
Gene ID: HRGMv2_4539_1_8
Type: CAZyme
Location: 8606 - 10651 (+)
Type: CAZyme
Location: 8606 - 10651 (+)
Gene ID: HRGMv2_4539_1_9
Type: CAZyme
Location: 10684 - 12975 (+)
Type: CAZyme
Location: 10684 - 12975 (+)
Gene ID: HRGMv2_4539_1_10
Type: TC
Location: 13344 - 14942 (-)
Type: TC
Location: 13344 - 14942 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp019417665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.