Cluster: HRGMv2_4536_CGC52
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4536
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4536_90 | HRGMv2_4536_90_66 | 89341 | 90963 | + | GH13_23 |
| pfam | HRGMv2_4536_90 | HRGMv2_4536_90_67 | 91191 | 91781 | + | MFS_1_like |
| pfam | HRGMv2_4536_90 | HRGMv2_4536_90_68 | 91757 | 92074 | + | TctB |
| TC | HRGMv2_4536_90 | HRGMv2_4536_90_69 | 92076 | 93317 | + | 2.A.80.1.1 |
Gene ID: HRGMv2_4536_90_66
Type: CAZyme
Location: 89341 - 90963 (+)
Type: CAZyme
Location: 89341 - 90963 (+)
Gene ID: HRGMv2_4536_90_67
Type: pfam
Location: 91191 - 91781 (+)
Type: pfam
Location: 91191 - 91781 (+)
Gene ID: HRGMv2_4536_90_68
Type: pfam
Location: 91757 - 92074 (+)
Type: pfam
Location: 91757 - 92074 (+)
Gene ID: HRGMv2_4536_90_69
Type: TC
Location: 92076 - 93317 (+)
Type: TC
Location: 92076 - 93317 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.