Cluster: HRGMv2_4536_CGC50
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4536
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4536_85 | HRGMv2_4536_85_20 | 18867 | 19805 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_4536_85 | HRGMv2_4536_85_21 | 19827 | 22238 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4536_85 | HRGMv2_4536_85_22 | 22285 | 23337 | - | GT4 |
| CAZyme | HRGMv2_4536_85 | HRGMv2_4536_85_23 | 23334 | 24488 | - | GT4 |
| TC | HRGMv2_4536_85 | HRGMv2_4536_85_24 | 24513 | 25925 | - | 9.B.18.1.1 |
Gene ID: HRGMv2_4536_85_20
Type: CAZyme
Location: 18867 - 19805 (-)
Type: CAZyme
Location: 18867 - 19805 (-)
Gene ID: HRGMv2_4536_85_21
Type:
Location: 19827 - 22238 (-)
Type:
Location: 19827 - 22238 (-)
Gene ID: HRGMv2_4536_85_22
Type: CAZyme
Location: 22285 - 23337 (-)
Type: CAZyme
Location: 22285 - 23337 (-)
Gene ID: HRGMv2_4536_85_23
Type: CAZyme
Location: 23334 - 24488 (-)
Type: CAZyme
Location: 23334 - 24488 (-)
Gene ID: HRGMv2_4536_85_24
Type: TC
Location: 24513 - 25925 (-)
Type: TC
Location: 24513 - 25925 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.