Cluster: HRGMv2_4536_CGC40
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4536
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4536_75 | HRGMv2_4536_75_28 | 26354 | 29362 | - | GT39 |
| pfam | HRGMv2_4536_75 | HRGMv2_4536_75_29 | 29387 | 30781 | - | tRNA-synt_1e | DALR_2 | tRNA-synt_1g | tRNA-synt_1g | CysS_C |
| NULL(UNKNOWN) | HRGMv2_4536_75 | HRGMv2_4536_75_30 | 30858 | 32801 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4536_75 | HRGMv2_4536_75_31 | 32821 | 33396 | - | 4.F.1.1.7 |
Gene ID: HRGMv2_4536_75_28
Type: CAZyme
Location: 26354 - 29362 (-)
Type: CAZyme
Location: 26354 - 29362 (-)
Gene ID: HRGMv2_4536_75_29
Type: pfam
Location: 29387 - 30781 (-)
Type: pfam
Location: 29387 - 30781 (-)
Gene ID: HRGMv2_4536_75_30
Type:
Location: 30858 - 32801 (-)
Type:
Location: 30858 - 32801 (-)
Gene ID: HRGMv2_4536_75_31
Type: TC
Location: 32821 - 33396 (-)
Type: TC
Location: 32821 - 33396 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.