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Cluster: HRGMv2_4536_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4536_65 HRGMv2_4536_65_42 48302 48850 - 2.A.87.3.1
pfam HRGMv2_4536_65 HRGMv2_4536_65_43 48862 49263 - NusG_II
pfam HRGMv2_4536_65 HRGMv2_4536_65_44 49250 49747 - Cytidylate_kin2 | Cytidylate_kin2
TC HRGMv2_4536_65 HRGMv2_4536_65_45 49903 51657 - 2.A.21.9.1
TF HRGMv2_4536_65 HRGMv2_4536_65_46 51746 52432 + Trans_reg_C
CAZyme HRGMv2_4536_65 HRGMv2_4536_65_47 52565 54796 - GH36
CAZyme HRGMv2_4536_65 HRGMv2_4536_65_48 54777 56228 - GH32
TC HRGMv2_4536_65 HRGMv2_4536_65_49 56301 57731 - 4.A.1.2.9
Gene ID: HRGMv2_4536_65_42
Type: TC
Location: 48302 - 48850 (-)
Gene ID: HRGMv2_4536_65_43
Type: pfam
Location: 48862 - 49263 (-)
Gene ID: HRGMv2_4536_65_44
Type: pfam
Location: 49250 - 49747 (-)
Gene ID: HRGMv2_4536_65_45
Type: TC
Location: 49903 - 51657 (-)
Gene ID: HRGMv2_4536_65_46
Type: TF
Location: 51746 - 52432 (+)
Gene ID: HRGMv2_4536_65_47
Type: CAZyme
Location: 52565 - 54796 (-)
Gene ID: HRGMv2_4536_65_48
Type: CAZyme
Location: 54777 - 56228 (-)
Gene ID: HRGMv2_4536_65_49
Type: TC
Location: 56301 - 57731 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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