dbCAN Logo

Cluster: HRGMv2_4536_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4536_58 HRGMv2_4536_58_7 5261 6010 - GT26
TF HRGMv2_4536_58 HRGMv2_4536_58_8 6326 7018 - Trans_reg_C
STP HRGMv2_4536_58 HRGMv2_4536_58_9 7011 8114 - HATPase_c | HisKA
TC HRGMv2_4536_58 HRGMv2_4536_58_10 8332 8979 - 2.A.38.4.4
TC HRGMv2_4536_58 HRGMv2_4536_58_11 8998 10329 - 2.A.38.4.1
TC HRGMv2_4536_58 HRGMv2_4536_58_12 10488 11870 - 2.A.25.1.3
TF HRGMv2_4536_58 HRGMv2_4536_58_13 12096 12932 + HTH_1
STP HRGMv2_4536_58 HRGMv2_4536_58_14 13035 14132 + Peripla_BP_2
TC HRGMv2_4536_58 HRGMv2_4536_58_15 14178 15182 + 3.A.1.14.8
TC HRGMv2_4536_58 HRGMv2_4536_58_16 15172 15957 + 3.A.1.14.13
TC HRGMv2_4536_58 HRGMv2_4536_58_17 16154 17599 + 2.A.40.2.1
Gene ID: HRGMv2_4536_58_7
Type: CAZyme
Location: 5261 - 6010 (-)
Gene ID: HRGMv2_4536_58_8
Type: TF
Location: 6326 - 7018 (-)
Gene ID: HRGMv2_4536_58_9
Type: STP
Location: 7011 - 8114 (-)
Gene ID: HRGMv2_4536_58_10
Type: TC
Location: 8332 - 8979 (-)
Gene ID: HRGMv2_4536_58_11
Type: TC
Location: 8998 - 10329 (-)
Gene ID: HRGMv2_4536_58_12
Type: TC
Location: 10488 - 11870 (-)
Gene ID: HRGMv2_4536_58_13
Type: TF
Location: 12096 - 12932 (+)
Gene ID: HRGMv2_4536_58_14
Type: STP
Location: 13035 - 14132 (+)
Gene ID: HRGMv2_4536_58_15
Type: TC
Location: 14178 - 15182 (+)
Gene ID: HRGMv2_4536_58_16
Type: TC
Location: 15172 - 15957 (+)
Gene ID: HRGMv2_4536_58_17
Type: TC
Location: 16154 - 17599 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List