Cluster: HRGMv2_4536_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4536
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4536_5 | HRGMv2_4536_5_10 | 10313 | 11209 | - | 8.A.21.2.2 |
| pfam | HRGMv2_4536_5 | HRGMv2_4536_5_11 | 11241 | 11690 | - | NfeD |
| CAZyme | HRGMv2_4536_5 | HRGMv2_4536_5_12 | 11944 | 13794 | - | GH13_39 |
| CAZyme | HRGMv2_4536_5 | HRGMv2_4536_5_13 | 13865 | 16267 | - | GT35 |
Gene ID: HRGMv2_4536_5_10
Type: TC
Location: 10313 - 11209 (-)
Type: TC
Location: 10313 - 11209 (-)
Gene ID: HRGMv2_4536_5_11
Type: pfam
Location: 11241 - 11690 (-)
Type: pfam
Location: 11241 - 11690 (-)
Gene ID: HRGMv2_4536_5_12
Type: CAZyme
Location: 11944 - 13794 (-)
Type: CAZyme
Location: 11944 - 13794 (-)
Gene ID: HRGMv2_4536_5_13
Type: CAZyme
Location: 13865 - 16267 (-)
Type: CAZyme
Location: 13865 - 16267 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.