Cluster: HRGMv2_4536_CGC14
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4536
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4536_40 | HRGMv2_4536_40_18 | 15781 | 16794 | + | 9.B.146.1.3 |
| TC | HRGMv2_4536_40 | HRGMv2_4536_40_19 | 16849 | 18141 | + | 2.A.103.1.1 |
| CAZyme | HRGMv2_4536_40 | HRGMv2_4536_40_20 | 18174 | 19289 | + | GT28 |
Gene ID: HRGMv2_4536_40_18
Type: TC
Location: 15781 - 16794 (+)
Type: TC
Location: 15781 - 16794 (+)
Gene ID: HRGMv2_4536_40_19
Type: TC
Location: 16849 - 18141 (+)
Type: TC
Location: 16849 - 18141 (+)
Gene ID: HRGMv2_4536_40_20
Type: CAZyme
Location: 18174 - 19289 (+)
Type: CAZyme
Location: 18174 - 19289 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.