Cluster: HRGMv2_4535_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4535
- CGC Family ID: CGCFAM_09165
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4535_9 | HRGMv2_4535_9_2 | 1288 | 2235 | + | 3.A.1.1.10 |
| TC | HRGMv2_4535_9 | HRGMv2_4535_9_3 | 2253 | 3143 | + | 3.A.1.1.10 |
| NULL(UNKNOWN) | HRGMv2_4535_9 | HRGMv2_4535_9_4 | 3170 | 4861 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4535_9 | HRGMv2_4535_9_5 | 5059 | 6543 | + | GH32 |
| TF | HRGMv2_4535_9 | HRGMv2_4535_9_6 | 6845 | 7516 | + | Trans_reg_C |
| TC | HRGMv2_4535_9 | HRGMv2_4535_9_7 | 7599 | 8513 | + | 3.A.1.131.1 |
Gene ID: HRGMv2_4535_9_2
Type: TC
Location: 1288 - 2235 (+)
Type: TC
Location: 1288 - 2235 (+)
Gene ID: HRGMv2_4535_9_3
Type: TC
Location: 2253 - 3143 (+)
Type: TC
Location: 2253 - 3143 (+)
Gene ID: HRGMv2_4535_9_4
Type:
Location: 3170 - 4861 (+)
Type:
Location: 3170 - 4861 (+)
Gene ID: HRGMv2_4535_9_5
Type: CAZyme
Location: 5059 - 6543 (+)
Type: CAZyme
Location: 5059 - 6543 (+)
Gene ID: HRGMv2_4535_9_6
Type: TF
Location: 6845 - 7516 (+)
Type: TF
Location: 6845 - 7516 (+)
Gene ID: HRGMv2_4535_9_7
Type: TC
Location: 7599 - 8513 (+)
Type: TC
Location: 7599 - 8513 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Acutalibacter
Species
Acutalibacter sp019416395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.