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PROTEIN: HRGMv2_4535_9_4

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4535_9_4.pdb
Genome ID:
HRGMv2_4535
Protein ID:
HRGMv2_4535_9_4

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKLIACVLI   CTCLLSLAAC   GDSGNSYTFD   QADLDHLVND   YGFQWTDPDS   PILNQQGAED 60
LTFNIYSSKN   ASALDYNDMK   IMKDLFDQTQ   VTVNWENVSE   SVYSQQKNLI   FGNVDDRPDA 120
IYHAGMSAGE   IMKYAKRGVF   VPISDYLEYM   PNFAKILEER   PDIKAQLTNP   EDGKIYSLPR 180
VEEIGLQENP   NILFLNKNWA   AQAIKAGAVS   DLSEEDLVDG   LSLTSQQMED   LLRYFKENDM 240
NGNGNTDDER   PLSFVYNNWQ   GNQCDLYGMF   GINDNLEHRV   VVDGKVTYTI   QDKRFQEATN 300
FLAGWVNEGL   IDKVSFEITQ   DNFLANGKGE   ETYGAFYWWE   SETVVSHPEN   YIVCSPLIGP 360
NGDQTVCVSN   NPEITIGEMV   IFSKCENFPV   LLAYLDRYYD   PVISAQINYG   PIGIVYEEQP 420
DADGKLVQKP   IPEGMTADEL   RLQNAPMGIV   YLSDYAWEHV   VNLEDRAQLR   VERLNQFVKP 480
HVPDNVTPCP   NLQFTLDEWN   TLNDCETSLN   NYVRTSLIQW   LLNGGVSDSQ   WDTFQKDLKD 540
KVQIDRIQQV   YQAAYDRYSS   NSN 563
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 33 561 28 502 0.7014 0.7983
AF-A0A133D019-F1-model_v4 59 561 35 485 0.6406 0.7521
AF-A0A132ZDH4-F1-model_v4 55 543 25 427 0.5832 0.7138
AF-K0EMP7-F1-model_v4 26 554 26 444 0.5777 0.6969
AF-K0F002-F1-model_v4 18 550 33 439 0.5776 0.7104
AF-Q9CBN6-F1-model_v4 58 550 35 446 0.5758 0.7052
AF-A0A0H3GHK7-F1-model_v4 55 553 16 431 0.5751 0.6919
AF-A0A133CPC5-F1-model_v4 41 550 27 423 0.5748 0.7098
AF-P59214-F1-model_v4 32 550 31 423 0.5737 0.7141
AF-K0F8J3-F1-model_v4 60 550 28 434 0.5711 0.7001
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 25 561 33 506 0.6779 0.7763
A0A9Q8PNJ5 GH4 1 550 257 866 0.4575 0.572
A0A242CSU4 CBM35 58 563 572 997 0.4339 0.7082
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 25 561 33 506 0.6779 0.7763
K8EJG7 CBM50 , CE4 57 550 31 417 0.5768 0.7219
A0A9Q8PNJ5 GH4 1 550 257 866 0.4575 0.572
A0A242CSU4 CBM35 58 563 572 997 0.4339 0.7082
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5g5y-assembly1.cif.gz_A 55 563 1 494 0.8693 0.9338
6fth-assembly1.cif.gz_A 56 563 1 496 0.8147 0.8784
3omb-assembly1.cif.gz_A 41 560 2 503 0.8141 0.8734
5g62-assembly2.cif.gz_B 62 563 1 491 0.7903 0.8589
5xs8-assembly1.cif.gz_A 62 555 1 474 0.7407 0.8194
4tqu-assembly1.cif.gz_Q 48 563 2 492 0.7264 0.7947
5h6u-assembly1.cif.gz_A 48 560 1 487 0.7247 0.7943
3vlw-assembly2.cif.gz_B 49 560 1 489 0.7223 0.7909
6jhx-assembly2.cif.gz_B 48 557 1 483 0.7163 0.7886
5suo-assembly1.cif.gz_A 58 561 1 451 0.6618 0.7523
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H2URD6-F1-model_v4 27 563 30 538 0.8574 0.9332
AF-P37966-F1-model_v4 37 560 27 502 0.7124 0.8087
AF-Q795R2-F1-model_v4 35 560 30 498 0.7023 0.8055
AF-Q8FVS7-F1-model_v4 56 550 19 411 0.6044 0.7413
AF-Q578M8-F1-model_v4 55 550 18 411 0.6039 0.7388
AF-Q2YKZ9-F1-model_v4 55 550 18 411 0.6031 0.7372
AF-O31518-F1-model_v4 39 550 26 427 0.5985 0.733
AF-O07009-F1-model_v4 31 550 27 421 0.5895 0.7286
AF-O06989-F1-model_v4 57 551 31 416 0.5828 0.7304
AF-O50499-F1-model_v4 2 556 1 469 0.5785 0.6529
Download Full SwissProt Results