Cluster: HRGMv2_4534_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4534
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4534_1 | HRGMv2_4534_1_57 | 58523 | 61300 | + | GH2 |
| TF | HRGMv2_4534_1 | HRGMv2_4534_1_58 | 61734 | 62207 | - | MarR |
| TC | HRGMv2_4534_1 | HRGMv2_4534_1_59 | 62482 | 63222 | + | 3.A.1.125.2 |
| TC | HRGMv2_4534_1 | HRGMv2_4534_1_60 | 63247 | 66384 | + | 3.A.1.137.2 |
| NULL(UNKNOWN) | HRGMv2_4534_1 | HRGMv2_4534_1_61 | 66791 | 67750 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4534_1 | HRGMv2_4534_1_62 | 68389 | 69369 | + | 3.A.1.1.9 |
| TC | HRGMv2_4534_1 | HRGMv2_4534_1_63 | 69391 | 70428 | + | 3.A.1.1.29 |
Gene ID: HRGMv2_4534_1_57
Type: CAZyme
Location: 58523 - 61300 (+)
Type: CAZyme
Location: 58523 - 61300 (+)
Gene ID: HRGMv2_4534_1_58
Type: TF
Location: 61734 - 62207 (-)
Type: TF
Location: 61734 - 62207 (-)
Gene ID: HRGMv2_4534_1_59
Type: TC
Location: 62482 - 63222 (+)
Type: TC
Location: 62482 - 63222 (+)
Gene ID: HRGMv2_4534_1_60
Type: TC
Location: 63247 - 66384 (+)
Type: TC
Location: 63247 - 66384 (+)
Gene ID: HRGMv2_4534_1_61
Type:
Location: 66791 - 67750 (+)
Type:
Location: 66791 - 67750 (+)
Gene ID: HRGMv2_4534_1_62
Type: TC
Location: 68389 - 69369 (+)
Type: TC
Location: 68389 - 69369 (+)
Gene ID: HRGMv2_4534_1_63
Type: TC
Location: 69391 - 70428 (+)
Type: TC
Location: 69391 - 70428 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
JAHZIE01
Species
JAHZIE01 sp019419895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.